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# MPI=openmpi-4.1.2-intel2021.4.0
MPI=intelmpi-2021.7.0
if [[ "$MPI" =~ ^intel ]]; then
module load hdf5/1.10.7-impi-intel
export I_MPI_F90=ifort
else
module load hdf5/1.10.7-ompi-intel
export OMPI_MPIF90=ifort
fi
#################################################################
# Location of local hdf5 installed with same compiler being used for POT3D:
HDF5_INCLUDE_DIR="$HDF5_ROOT/include"
HDF5_LIB_DIR="$HDF5_ROOT/lib"
# Fortran HDF5 library flags (these can be version dependent):
HDF5_LIB_FLAGS="-lhdf5_fortran -lhdf5_hl_fortran -lhdf5 -lhdf5_hl""
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Sample build script for PSC:
Download HPC-X from ISC23 SCC Getting Started with Bridges-2 Cluster.
Download and install HDF5 before building POT3D.
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source /jet/packages/intel/oneapi/compiler/2022.1.0/env/vars.sh
source /jet/packages/intel/oneapi/mkl/2022.1.0/env/vars.sh
# MPI=intelmpi
MPI=hpcx
if [[ "$MPI" =~ ^hpcx ]]; then
module use $HOME/hpcx-2.13.1/modulefiles
module load hpcx
export OMPI_MPICC=icc
export OMPI_MPICXX=icpc
export OMPI_MPIFC=ifort
export OMPI_MPIF90=ifort
export FC=mpif90
else
source /jet/packages/intel/oneapi/mpi/2021.6.0/env/vars.sh
export FC=mpiifort
fi
#################################################################
# Location of local hdf5 installed with same compiler being used for POT3D:
HDF5_INCLUDE_DIR="$HDF5_ROOT/include"
HDF5_LIB_DIR="$HDF5_ROOT/lib"
# Fortran HDF5 library flags (these can be version dependent):
HDF5_LIB_FLAGS="-lhdf5_fortran -lhdf5_hl_fortran -lhdf5 -lhdf5_hl""
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Running an Example
The following commands will run a test case with NP MPI ranks and validate that the code is working.
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