Elmer is a finite element software for multiphysical problems published under open source. Elmer is mainly but not exclusively developed by CSC – IT Center for Science.
Elmer/ICE is Open Source Finite Element Software for Ice Sheet, Glaciers and Ice Flow Modelling.
References
To Compile Elmer follow this wiki.
Notes:
2. Load the relevant modules e.g.
Build Procedure
1. Retrieve the source and unpack it. Here we clone the whole repository:
$ git clone https://www.github.com/ElmerCSC/elmerfem
2. Create build directory
$ mkdir elmer-build
3. Elmer compilation system is built upon CMake which utilizes out of source builds strongly.
Create pre-cache file, and save it as, f.ex, elmer-opts.cmake for CMake which contains something like this:
SET(CMAKE_INSTALL_PREFIX "$ENV{PWD}/../elmer-install" CACHE PATH "") SET(CMAKE_C_COMPILER "gcc" CACHE STRING "") SET(CMAKE_CXX_COMPILER "g++" CACHE STRING "") SET(CMAKE_Fortran_COMPILER "gfortran" CACHE STRING "")
Here you can choose the installation directory for Elmer as well by modifying variable the CMAKE_INSTALL_PREFIX.
In case, you are using intel compiler set elmer-opts.cmake to be as follows:
SET(CMAKE_INSTALL_PREFIX "../elmer-install" CACHE PATH "") SET(CMAKE_C_COMPILER "icc" CACHE STRING "") SET(CMAKE_CXX_COMPILER "icpc" CACHE STRING "") SET(CMAKE_Fortran_COMPILER "ifort" CACHE STRING "")
4. Load the relevant modules e.g.
$ module list Currently Loaded Modulefiles: 1) cmake/3.13.4 2) intel/2018.5.274 3) hpcx/2.4.0 4) mkl/2018.5.274
5. Generate build scripts
$ cd elmer-build --- For elmer use $ cmake -C ../elmer-opts.cmake ../elmerfem --- For elmer/ice add the bool flag $ cmake -C ../elmer-opts.cmake ../elmerfem -DWITH_ElmerIce:BOOL=TRUE ... -- ------------------------------------------------ -- Package filename: elmerfem-8.4-9d3f59b-20190807_Linux-x86_64 -- Patch version: 8.4-9d3f59b -- Configuring done -- Generating done -- Build files have been written to: ..... /elmer-build
The cmake tool will now inform if any libraries are missing. The build configuration can be further edited using e.g. ccmake tool or cmake-gui application.
6. Build and install
$ make -j8 install
Testing Elmer
Quick tests
Go to the build directory and run ctest -L quick or ctest -L fast for some basic tests.
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